Merge pull request #47 from toastisme/tof_outlier_rejection

Change default outlier rejection for tof data during refinement to mcd.

src/dials/command_line/refine.py

@@ -291,6 +291,9 @@ def run_dials_refine(experiments, reflections, params):
  # Similarly, keep track of sparse to reset that for scan-varying macrocycle
  sparse = params.refinement.parameterisation.sparse
 
+ if experiments.all_tof_experiments():
+ print(params.refinement.reflections.outlier)
+ params.refinement.reflections.outlier.algorithm = "mcd"
  if params.n_static_macrocycles == 1:
  refiner, reflections, history = run_macrocycle(params, reflections, experiments)
  experiments = refiner.get_experiments()