Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work in progress. Many things are broken, and the codebase is not stable.
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Updated
Jul 14, 2020 - Python
Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work in progress. Many things are broken, and the codebase is not stable.
Named Entity Recognition with Small Strongly Labeled and Large Weakly Labeled Data
Bioinformatics'2023: Consistency Enhancement of Model Prediction on Document-level Named Entity Recognition
NERO-nlp is a PyPI package for biomedical Named Entity (Recognition) Ontology
The project is in the incubation stage and still under development. ForteHealth is a flexible and powerful ML workflow builder for biomedical and clinical scenarios. This is part of the CASL project: http://casl-project.ai/
A light-weighted UMLS-based data augmentation for biomedical NLP tasks including Named Entity Recognition and sentence classification.
Named Entity Recognition using BERT
Simple exact-matching algorithm to standardise drug names appearing on the DrugBank open-access repository
Extraction of Drug-Drug Interactions from Biomedical Texts
BioNER: Named Entity Recognition in the Biomedical Domain
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