An ImageJ plugin to quantify ciliary shape, length, and fluorescence.

CiliaMiner: an integrated database for Ciliopathy Genes and Ciliopathies

Python package to study systems of coupled phase oscillators

This repository contains few Convolution based networks implemented for detecting cilia which is completed on CSCI 8360, Data Science Practicum at the University of Georgia, Spring 2018.

Stokes: Python package to create triangulated surface mesh and solve hydrodynamic Stokes equation

CilioGenics is an integrated method for predicting the ciliary genes

Presentation materials for my talk on cilia segmentation for Jupyter Day ATL.

Scripts for computing metrics from ciliary motion.

Semantic Segmentation on Cilia Images Using Tiramisu Network in PyTorch.

Team Goucher implementation of project 4 ( Cilia Segmentation ) of Data Science Practicum Spring 2018

Python code to reconstruct a three-dimensional space curve from two orthogonal two-dimensional projections.

Plugins for ImageJ/FIJI

MICCAI conference