This is the command line version of MiFish pipeline. It can also be used with any other eDNA meta-barcoding primers
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May 14, 2024 - Python
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edna-pipeline
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metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.
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Jan 17, 2023 - HTML
eDNA metabarcoding code for Marine Protected Area monitoring
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Nov 5, 2024 - HTML
A snakemake workflow based on the obitools suite of programs, that analyzes DNA metabarcoding data.
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Aug 30, 2024 - Python
repository of data examples for the R package metabaR
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Mar 29, 2022
Metabarcoding Joining Obitools3 & Linkage Networks In R
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Jun 6, 2024 - R
Code and repository links for Klein & Frühe et al. 2024
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Jul 21, 2024 - R
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