biosimulators / Biosimulators Star 13 Code Issues Pull requests Discussions Registry of containerized biosimulation tools that support a standard command-line interface docker simulation systems-biology computational-biology reuse reproducibility combine sbml mathematical-model sbo sed-ml omex kinetic-model kisao Updated Sep 20, 2024 Python
biosimulators / Biosimulators_PySCeS Star 1 Code Issues Pull requests PySCeS biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container simulation systems-biology computational-biology combine sbml mathematical-model sed-ml omex biochemical-network biosimulators kinetic-model Updated Sep 20, 2024 Python
biosimulators / Biosimulators_iBioSim Star 0 Code Issues Pull requests CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container simulation systems-biology computational-biology combine sbml mathematical-model sed-ml omex biochemical-network biosimulators kinetic-model Updated Dec 14, 2021 Python