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microbe-subspecies

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JJChenCharly / OrthoSLC

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OrthoSLC: A pipeline to get Orthologous Genes using Reciprocal Best Blast Hit (RBBH) Single Linkage Clustering, indenpendent of relational database management system

lightweight bioinformatics genomics jupyter-notebook large-scale single-linkage-clustering large-dataset pan-genome core-genome dereplication pre-compiled reciprocal-blast-hits microbe-subspecies independent-of-mysql cpp-callable-binary convenient-installation
  • Updated Oct 21, 2024
  • Jupyter Notebook

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