The codebase of the OpenMS project
PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering
SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)
sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java
pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
Fast and Accurate CE-, GC- and LC-MS(/MS) Data Processing
Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis
pyQms, generalized, fast and accurate mass spectrometry data quantification
IsoCor: Isotope Correction for mass spectrometry labeling experiments
A tool for mass spectrometry data analysis.
🐍 Open-Source Software for the semi-automated analysis of glycopeptide mass spectrometry data
Simultaneous measurement of absolute metabolite concentration and isotope incorporation by mass spectrometry
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