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ms-data

Here are 12 public repositories matching this topic...

glyXera / glyXtoolMS

🐍 Open-Source Software for the semi-automated analysis of glycopeptide mass spectrometry data

python open-source bioinformatics mass-spectrometry openms ms-data glycoproteomics

Updated Oct 4, 2018
Python

MetaSys-LISBP / IsoQ

Simultaneous measurement of absolute metabolite concentration and isotope incorporation by mass spectrometry

metabolomics mass-spectrometry ms-data isotope fluxomics metabolic-flux-analysis 13c-mfa isotope-labeling-experiments isotopologue-distribution

Updated Dec 13, 2019
Python

AutoFlowResearch / SmartPeak

Fast and Accurate CE-, GC- and LC-MS(/MS) Data Processing

bioinformatics mass-spectrometry lc-ms ms-data analyses biotechnology gc-ms biotech lc-msms

Updated Feb 22, 2023
C++

novak-jiri / cyclobranch

A tool for mass spectrometry data analysis.

bioinformatics metabolomics mass-spectrometry lc-ms ms-data imaging peptide-identification peptides mzml image-fusion desi-msi imzml de-novo dereplication mass-spectrometry-imaging bioinformatics-tool maldi-msi

Updated Aug 21, 2023
C++

MetaSys-LISBP / IsoCor

IsoCor: Isotope Correction for mass spectrometry labeling experiments

metabolomics mass-spectrometry ms-data isotope fluxomics metabolic-flux-analysis 13c-mfa isotope-labeling-experiments isotope-correction correction-natural-abundance isotopologue-distribution isotopic-inchi

Updated Nov 8, 2023
Python

pyQms / pyqms

pyQms, generalized, fast and accurate mass spectrometry data quantification

computational-biology proteomics metabolomics mass-spectrometry ms-data lipidomics

Updated Jun 28, 2024
Python

ursgal / ursgal

Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis

python proteomics mass-spectrometry ms-data omics proteomics-data peptide-identification mzml

Updated Mar 2, 2024
Python

sirius-ms / sirius-libs

sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java

bioinformatics cheminformatics scientific-computing java-library metabolomics mass-spectrometry ms-data denovo molecular-formulas ms-spectra

Updated Aug 1, 2024
Java

philosopher

Nesvilab / philosopher

PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering

go bioinformatics data-analysis proteomics mass-spectrometry ms-data

Updated Nov 12, 2024
Go

sirius-ms / sirius

SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)

java science bioinformatics cheminformatics molecular-structures sirius metabolomics mass-spectrometry ms-data denovo molecular-formulas ms-spectra structure-elucidation fragmentation-trees csi-fingerid fingerid isotope-pattern mass-spectra

Updated Oct 28, 2024
Java

OpenMS / pyopenms-docs

pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.

python openms ms-data hacktoberfest hacktoberfest2022

Updated Nov 8, 2024
Python

OpenMS / OpenMS

The codebase of the OpenMS project

windows macos linux c-plus-plus algorithms proteomics metabolomics mass-spectrometry openms ms-data analyses hacktoberfest 3-clause-bsd

Updated Nov 22, 2024
C++

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