navis-org / navis Star 79 Code Issues Pull requests Discussions Python library for analysis of neuroanatomical data. visualization python blender neuroscience transform segmentation neurons swc volumes skeletons anatomy meshes 3d connectome neuroanatomy nblast flywire neuprint hemibrain morphometric Updated Jul 12, 2024 Python
seung-lab / RealNeuralNetworks.jl Star 38 Code Issues Pull requests A unified framework for skeletonization, morphological analysis, and connectivity analysis. julia neurons connectome skeletonization nblast neuron-morphology Updated Sep 15, 2023 Julia
navis-org / pymaid Star 23 Code Issues Pull requests Python library to interface with CATMAID servers. Fully interoperable with navis. python blender3d neuron anatomy catmaid nblast Updated Apr 12, 2024 Python
natverse / nat.nblast Star 16 Code Issues Pull requests R package implementing the NBLAST neuron search algorithm, as an add-on for the NeuroAnatomy Toolbox (nat) R package. neurons morphological-analysis neuroanatomy neuroanatomy-toolbox nblast Updated Jun 13, 2023 R
flyconnectome / nblast-scoremats Star 0 Code Issues Pull requests Collection of scoring matrices for NBLAST morphology similarity neuron scores nblast Updated Aug 8, 2022
navis-org / navis-nblast-large Star 0 Code Issues Pull requests Implementation of NBLAST for large datasets neurons large-scale nblast Updated May 23, 2022 Python