rep-seq
Here are 14 public repositories matching this topic...
Code and scripts used for Worth et al. 2022: "Receptor editing constrains development of phosphatidyl choline-specific B cells in VH12-transgenic mice".
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May 24, 2022 - R
Browser of clonal trees showing evolutionary development of antibodies with ultra-long CDR3s in 50 cattle individuals
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Aug 29, 2018
Clustering of immune receptor repertoires
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Jul 7, 2024 - R
Substitution Profiles Using Related Families
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Aug 2, 2018 - Python
Comparison of Adaptive Immune Receptor Repertoires
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Jun 16, 2023 - C++
⚙️ A lightweight immune repertoire browser
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Dec 10, 2019 - JavaScript
⚙️ Matching T-cell repertoire against a database of TCR antigen specificities
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Nov 12, 2018 - Groovy
A RepSeq processing swiss-knife
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Mar 29, 2024 - Groovy
🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.
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May 21, 2020
HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
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Mar 2, 2018 - Groovy
Post-analysis of immune repertoire sequencing data
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May 23, 2024 - Groovy
🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
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Apr 9, 2024 - R
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
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Jul 10, 2024 - Kotlin
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