rna-seq
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A repository for setting up a RNAseq workflow
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Apr 10, 2017 - R
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Sep 21, 2024 - Jupyter Notebook
A single-cell RNAseq pipeline for 10X genomics data
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Sep 30, 2024 - Nextflow
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
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May 29, 2024 - C++
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Oct 1, 2024 - R
NicheNet: predict active ligand-target links between interacting cells
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Sep 5, 2024 - R
RNA-seq analysis pipeline for detection of gene-fusions
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Sep 23, 2024 - Nextflow
RNA velocity estimation in Python
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Aug 14, 2023 - Python
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
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Oct 2, 2024 - Kotlin
Table of software for the analysis of single-cell RNA-seq data.
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Oct 3, 2024 - R
zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
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Jul 12, 2024 - R
Finder of Somatic Fusion Genes in RNA-seq data
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Apr 14, 2023 - Python
Statistical Analysis of RNA-Seq Tools
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Jun 13, 2023 - R
An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study
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Jul 1, 2022 - Jupyter Notebook
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