HKU-BAL / Clair3 Star 226 Code Issues Pull requests Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling deep-learning nanopore genomics computational-biology pacbio variant-calling illumina long-reads variant-detection ont-data ont-models Updated Jun 3, 2024 Python
bcgsc / ntEdit Star 62 Code Issues Pull requests ✏️ Genome assembly polishing & SNV detection c-plus-plus bloom-filter polishing draft-genome variant-detection Updated May 21, 2024 C++
rki-mf1 / vocal Star 5 Code Issues Pull requests Vocal is a simple Variants Of Concern ALert system script. Doc https://rki-mf1.github.io/vocal-doc/ vocal variant-detection sars-cov-2 early-warning-system integrated-molecular-surveillance Updated Jul 9, 2024 Python
jhudsl / GDSCN_Book_SARS_Galaxy_on_AnVIL Star 0 Code Issues Pull requests Lab module and lectures for variant detection in SARS-CoV-2 using Galaxy course module genomics anvil variant-detection sars-cov-2 gdscn Updated Jul 11, 2023 CSS