Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche-psb/wgd.
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Oct 11, 2023 - Python
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wgd
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wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication
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Oct 25, 2024 - Python
ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.
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Jun 28, 2024 - Python
Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation
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Sep 29, 2022 - Julia
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