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TrackMate extension for oneat for verifying lineage trees
Oneat is a keras based action classification library written by us and TrackMate-oneat is its Fiji extension that uses the results of detection of such cell events to correct lineage trees in TrackMate. More details
Auto Track Correction using TrackMate-Oneat was granted access to the HPC resources of IDRIS under the allocation 2022 - [AD011013724], 2023 - [AD011013724R1] made by GENCI. We used the resources to create training data and inference on the imaging datasets.
