Remove useless method.

trackmate-sc · Jun 5, 2024 · 41b8986 · 41b8986
1 parent cc2e5b1
commit 41b8986
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Showing 2 changed files with 14 additions and 19 deletions.
diff --git a/src/main/java/fiji/plugin/trackmate/tracking/kdtree/NearestNeighborTracker.java b/src/main/java/fiji/plugin/trackmate/tracking/kdtree/NearestNeighborTracker.java
@@ -45,7 +45,6 @@
 import fiji.plugin.trackmate.SpotCollection;
 import fiji.plugin.trackmate.tracking.SpotTracker;
 import fiji.plugin.trackmate.util.Threads;
-import fiji.plugin.trackmate.util.TMUtils;
 import net.imglib2.KDTree;
 import net.imglib2.RealPoint;
 import net.imglib2.algorithm.MultiThreadedBenchmarkAlgorithm;
@@ -142,7 +141,7 @@ public Void call() throws Exception
 					{
 						final double[] coords = new double[ 3 ];
 						final Spot spot = targetIt.next();
-						TMUtils.localize( spot, coords );
+						spot.localize( coords );
 						targetCoords.add( new RealPoint( coords ) );
 						targetNodes.add( new FlagNode<>( spot ) );
 					}
@@ -159,7 +158,7 @@ public Void call() throws Exception
 					{
 						final Spot source = sourceIt.next();
 						final double[] coords = new double[ 3 ];
-						TMUtils.localize( source, coords );
+						source.localize( coords );
 						final RealPoint sourceCoords = new RealPoint( coords );
 						search.search( sourceCoords );
 

diff --git a/src/main/java/fiji/plugin/trackmate/util/TMUtils.java b/src/main/java/fiji/plugin/trackmate/util/TMUtils.java
@@ -45,7 +45,6 @@
 import fiji.plugin.trackmate.Dimension;
 import fiji.plugin.trackmate.Logger;
 import fiji.plugin.trackmate.Settings;
-import fiji.plugin.trackmate.Spot;
 import ij.IJ;
 import ij.ImagePlus;
 import net.imagej.ImgPlus;
@@ -324,21 +323,18 @@ private static final double[] getRange( final double[] data )
 	}
 
 	/**
-	 * Store the x, y, z coordinates of the specified spot in the first 3
-	 * elements of the specified double array.
-	 */
-	public static final void localize( final Spot spot, final double[] coords )
-	{
-		coords[ 0 ] = spot.getFeature( Spot.POSITION_X ).doubleValue();
-		coords[ 1 ] = spot.getFeature( Spot.POSITION_Y ).doubleValue();
-		coords[ 2 ] = spot.getFeature( Spot.POSITION_Z ).doubleValue();
-	}
-
-	/**
-	 * Return the optimal bin number for a histogram of the data given in array,
-	 * using the Freedman and Diaconis rule (bin_space = 2*IQR/n^(1/3)). It is
-	 * ensured that the bin number returned is not smaller and no bigger than
-	 * the bounds given in argument.
+	 * Returns the optimal bin number for a histogram of the data given in
+	 * array, using the Freedman and Diaconis rule (bin_space = 2*IQR/n^(1/3)).
+	 * It is ensured that the bin number returned is not smaller and no bigger
+	 * than the bounds given in argument.
+	 * 
+	 * @param values
+	 *            the values.
+	 * @param minBinNumber
+	 *            a minimal number of bins.
+	 * @param maxBinNumber
+	 *            a maximal number of bins.
+	 * @return a number of bins.
 	 */
 	public static final int getNBins( final double[] values, final int minBinNumber, final int maxBinNumber )
 	{