Be more tolerant when loading files with a missing spot.

Normally this would cause the reading of the edges and tracks to
stop immediatelly.
Now a warning is printed, but the other edges are imported.

src/main/java/fiji/plugin/trackmate/io/TmXmlReader.java

@@ -8,12 +8,12 @@
  * it under the terms of the GNU General Public License as
  * published by the Free Software Foundation, either version 3 of the
  * License, or (at your option) any later version.
- * 
+ *
  * This program is distributed in the hope that it will be useful,
  * but WITHOUT ANY WARRANTY; without even the implied warranty of
  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
  * GNU General Public License for more details.
- * 
+ *
  * You should have received a copy of the GNU General Public
  * License along with this program. If not, see
  * <http://www.gnu.org/licenses/gpl-3.0.html>.
@@ -936,7 +936,7 @@ private SpotCollection getSpots( final Element modelElement )
  */
  protected boolean readTracks( final Element modelElement, final Model model )
  {
-
+ boolean ok = true;
  final Element allTracksElement = modelElement.getChild( TRACK_COLLECTION_ELEMENT_KEY );
  final List< Element > trackElements = allTracksElement.getChildren( TRACK_ELEMENT_KEY );
 
@@ -984,19 +984,22 @@ protected boolean readTracks( final Element modelElement, final Model model )
  // Error check
  if ( null == sourceSpot )
  {
- logger.error( "Unknown spot ID: " + sourceID + "\n" );
- return false;
+ logger.error( "Unknown spot ID: " + sourceID + " - skipping edge " + sourceID + " → " + targetID + ".\n" );
+ ok = false;
+ continue;
  }
  if ( null == targetSpot )
  {
- logger.error( "Unknown spot ID: " + targetID + "\n" );
- return false;
+ logger.error( "Unknown spot ID: " + targetID + " - skipping edge " + sourceID + " → " + targetID + ".\n" );
+ ok = false;
+ continue;
  }
 
  if ( sourceSpot.equals( targetSpot ) )
  {
  logger.error( "Bad link for track " + trackID + ". Source = Target with ID: " + sourceID + "\n" );
- return false;
+ ok = false;
+ continue;
  }
 
  /*
@@ -1015,7 +1018,8 @@ protected boolean readTracks( final Element modelElement, final Model model )
  if ( edge == null )
  {
  logger.error( "Bad edge found for track " + trackID + "\n" );
- return false;
+ ok = false;
+ continue;
  }
 
  graph.setEdgeWeight( edge, weight );
@@ -1064,7 +1068,7 @@ protected boolean readTracks( final Element modelElement, final Model model )
  */
  model.getTrackModel().from( graph, connectedVertexSet, connectedEdgeSet, visibility, savedTrackNames );
 
- return true;
+ return ok;
  }
 
  /**