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ucscXena

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  1. ucsc-xena-client ucsc-xena-client Public

    Functional genomics browser

    JavaScript 57 42

  2. xenaPython xenaPython Public

    Python API for Xena Hub

    Python 52 15

  3. xena-GDC-ETL xena-GDC-ETL Public

    Extract, transform and load GDC data onto UCSC Xena

    Python 12 8

  4. wrangle wrangle Public

    data_wrangling

    Python 9 3

  5. ucsc-xena-server ucsc-xena-server Public

    Turn-key functional genomics data server.

    JavaScript 7 5

  6. kaplan-meier kaplan-meier Public

    Basic kaplan-meier methods in javascript

    JavaScript 5 3

Repositories

Showing 10 of 44 repositories
  • ucsc-xena-client Public

    Functional genomics browser

    ucscXena/ucsc-xena-client’s past year of commit activity
    JavaScript 57 Apache-2.0 42 107 (20 issues need help) 21 Updated Dec 13, 2024
  • cohortMetaData Public

    data cohort meta data displayed on xena cohort page; search by cohort tags

    ucscXena/cohortMetaData’s past year of commit activity
    Python 5 Apache-2.0 2 0 0 Updated Dec 3, 2024
  • gitbookdocs Public

    Documentation for our gitbook

    ucscXena/gitbookdocs’s past year of commit activity
    HTML 3 4 0 0 Updated Oct 28, 2024
  • xena-GDC-ETL Public

    Extract, transform and load GDC data onto UCSC Xena

    ucscXena/xena-GDC-ETL’s past year of commit activity
    Python 12 Apache-2.0 8 6 11 Updated Oct 14, 2024
  • Xena-GDC-auto-test Public
    ucscXena/Xena-GDC-auto-test’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Sep 20, 2024
  • xenaConvert Public
    ucscXena/xenaConvert’s past year of commit activity
    Python 0 0 0 0 Updated Jul 29, 2024
  • ucsc-xena-wasm Public

    wasm methods for UCSC xena

    ucscXena/ucsc-xena-wasm’s past year of commit activity
    C 0 Apache-2.0 0 0 0 Updated Jul 23, 2024
  • Xena-GDC-Detect_Missing_Datasets Public

    This is testing script that checks for differences between data sets on the Xena hub and the GDC, providing the user with specific datasets that need updating.

    ucscXena/Xena-GDC-Detect_Missing_Datasets’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Jun 28, 2024
  • wrangle Public

    data_wrangling

    ucscXena/wrangle’s past year of commit activity
    Python 9 3 3 0 Updated Dec 15, 2023
  • XenaGoWidget Public

    Xena Gene Set Viewer (demo: http://xenademo.berkeleybop.io/xena)

    ucscXena/XenaGoWidget’s past year of commit activity
    JavaScript 2 BSD-3-Clause 5 1 1 Updated Oct 8, 2023
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