ASD_CHDcombined_network_analysis

Comprehensive Jupyter notebooks and supporting code to reproduce the analysis from the paper 'A convergent molecular network underlying autism and congenital heart disease' (https://www.cell.com/cell-systems/fulltext/S2405-4712(21)00287-8)

For an updated and more user-friendly network colocalization analysis please see our related NetColoc package https://github.com/ucsd-ccbb/NetColoc

Name		Name	Last commit message	Last commit date
Latest commit History 37 Commits
.ipynb_checkpoints		.ipynb_checkpoints
NB4_netprox_many_disease_pairs		NB4_netprox_many_disease_pairs
NB7_clixo_analysis		NB7_clixo_analysis
data		data
netprop_zscore_code		netprop_zscore_code
LICENSE		LICENSE
NB1_network_localization_descriptive_stats_200604.ipynb		NB1_network_localization_descriptive_stats_200604.ipynb
NB2_analyze_DNV_overrepresentation_210419.ipynb		NB2_analyze_DNV_overrepresentation_210419.ipynb
NB3_test_ASD_CHD_specific_genes_200604.ipynb		NB3_test_ASD_CHD_specific_genes_200604.ipynb
NB5_check_brain_heart_expression_210419.ipynb		NB5_check_brain_heart_expression_210419.ipynb
NB6_significance_decipher_210419.ipynb		NB6_significance_decipher_210419.ipynb
NB8_ion_channel_significance_210419.ipynb		NB8_ion_channel_significance_210419.ipynb
README.md		README.md

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