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Very modular, very cool long-read transcriptomic simulator
C++ 5
Freddie: Annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing
Python 17 3
GENe fusION
C++ 7 1
10x single cell short- and long-read RNA sequencing
Python 11
A sensitive and fast tool for circular RNA detection from RNA-Seq data
C++ 10 4
Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.
HTML 38 9
Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA
Identification of segmental duplications in the genome
Long transcriptomic reads simulator
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