PyTorch ALMOND

Requirements

• Python = 3.8
• PyTorch = 1.9

Installation

git clone https://github.com/chunhyonho/Almond_torch.git
cd Almond_torch
pip install -r requirements.txt

Training VAE and ALMOND

You can find configuration files at here. You can choose any of them and run. Details are explained at here

python run.py experiment=<experiment_name>

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Results

Single cell data

Zhai

Process

Pure