Skip to content
@welch-lab

welch-lab

Popular repositories Loading

  1. liger liger Public

    R package for integrating and analyzing multiple single-cell datasets

    R 383 78

  2. MultiVelo MultiVelo Public

    Multi-omic velocity inference

    Python 106 12

  3. VeloVAE VeloVAE Public

    Deep Generative Modeling of RNA Velocity

    Jupyter Notebook 34 5

  4. PerturbNet PerturbNet Public

    PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation

    Python 29 10

  5. pyliger pyliger Public

    Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)

    Jupyter Notebook 28 5

  6. SquiggleNet SquiggleNet Public

    Python 20 6

Repositories

Showing 10 of 26 repositories
  • steamer Public
    welch-lab/steamer’s past year of commit activity
    Python 0 0 0 0 Updated Sep 30, 2024
  • MultiVelo Public

    Multi-omic velocity inference

    welch-lab/MultiVelo’s past year of commit activity
    Python 106 BSD-3-Clause 12 16 0 Updated Sep 30, 2024
  • welch-lab/RcppPlanc’s past year of commit activity
    C++ 3 GPL-2.0 1 2 0 Updated Sep 20, 2024
  • welch-lab.github.io Public Forked from vittala23/welchlab

    Welch Lab

    welch-lab/welch-lab.github.io’s past year of commit activity
    HTML 0 1,153 0 0 Updated Sep 20, 2024
  • CytoSimplex Public

    Simplex plot showing similarity between single-cells and clusters

    welch-lab/CytoSimplex’s past year of commit activity
    R 1 0 1 0 Updated Sep 18, 2024
  • welch-lab/cytosignal’s past year of commit activity
    R 13 0 2 0 Updated Sep 16, 2024
  • VeloVAE Public

    Deep Generative Modeling of RNA Velocity

    welch-lab/VeloVAE’s past year of commit activity
    Jupyter Notebook 34 BSD-3-Clause 5 5 0 Updated Aug 16, 2024
  • pyliger Public

    Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)

    welch-lab/pyliger’s past year of commit activity
    Jupyter Notebook 28 GPL-3.0 5 7 0 Updated Jul 14, 2024
  • TopoVelo Public
    welch-lab/TopoVelo’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Jul 10, 2024
  • welch-lab/ConvNetVAE’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 1 1 0 Updated May 30, 2024

Top languages

Loading…

Most used topics

Loading…