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OME-Zarr support #5

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OME-Zarr support #5

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will-moore
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@will-moore will-moore commented Dec 4, 2024

OMERO.figure without OMERO!

Uses zarrita.js to load OME-Zarr data and manually renders to image src.

Work in progress...

To test:

Screenshot 2024-12-09 at 10 45 07

TODOs to support zarr images:

  • Handle missing omero.channels when loading images - generate on the fly
  • Handle async get_img_src() everywhere
  • Add caching to avoid re-loading zarr data if possible
  • Only render a region of images (for big images zoomed in)
  • LUTs!

Other TODOs:

  • File > Open should ask for a file from URL or local file (when static deployed)
  • Support figure/?file=url-to-figure.json
  • File > Download... option (useful even without static deployment). With static deploy, File > Save should do this.

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