Merge pull request #36 from wjrl/revert-35-Sprint2

Revert "Sprint2"
wjrl · Feb 28, 2017 · 5b93c9c · 5b93c9c
2 parents f96b792 + 1f1e85c
commit 5b93c9c
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diff --git a/.gitignore b/.gitignore
@@ -2,22 +2,4 @@
 /dist/
 /build/
 /manifest.mf
-/nbbuild.xml
-/bin/
-/BioFabric-1.0.0.jar
-/installInMVN.sh
-/.project
-/.DS_Store
-/.classpath
-.idea/
-BioFabric Fork.iml
-BioFabric.iml
-out/
-src/META-INF/
-.gitignore
-org/.gitignore
-org/systemsbiology/.DS_Store
-org/systemsbiology/biofabric/
-org/systemsbiology/biotapestry/.gitignore
-org/systemsbiology/biotapestry/biofabric/.gitignore
-
+/nbbuild.xml
diff --git a/README.md b/README.md
@@ -1,8 +1,8 @@
 BioFabric
 =========
 
-The new development branch is in an experimental stage. It uses the new package organization.
-
-
+BioFabric is an open-source network visualization tool that uses a new approach: nodes are represented as horizontal lines instead of as points:
 
+![Les Miserables Network](http://www.biofabric.org/gallery/images/LesMiz1024.png)
 
+[Super-Quick Demo D3 Animation](http://www.biofabric.org/gallery/pages/SuperQuickBioFabric.html)
diff --git a/src/.gitignore b/src/.gitignore
diff --git a/src/org/.gitignore b/src/org/.gitignore
diff --git a/src/org/systemsbiology/biofabric/analysis/CycleFinder.java b/src/org/systemsbiology/biofabric/analysis/CycleFinder.java