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Output file format comments #4

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fanch1122 opened this issue Sep 6, 2023 · 0 comments
Open

Output file format comments #4

fanch1122 opened this issue Sep 6, 2023 · 0 comments

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@fanch1122
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I noticed that most of the output files have no header. Can you give a format comment? I got this:

SM	Contig12261.0	517	Contig12261.0	AUGUSTUS	exon	434	1837	0.98	+	.	transcript_id "g12501";	distance:83	Contig12261.0	1289	Contig12261.0	AUGUSTUS	exon	434	1837	0.98	+	.	transcript_id "g12501";	distance:855
SM	OXYTRI_MIC_93187	11205	 	 	 	 	 	 	 	 	 	 	OXYTRI_MIC_93187	11327	 	 	 	 	 	 	 	 	 	 
SM	OXYTRI_MIC_89755	42639	 	 	 	 	 	 	 	 	 	 	OXYTRI_MIC_89755	43203	 	 	 	 	 	 	 	 	 	 
SM	OXYTRI_MIC_89755	43122	 	 	 	 	 	 	 	 	 	 	OXYTRI_MIC_89755	43208	 	 	 	 	 	 	 	 	 	 
SM	Contig12261.0v1	1246	Contig12261.0v1	AUGUSTUS	exon	425	1828	1	+	.	transcript_id "g18530";	distance:821	Contig12261.0v1	1312	Contig12261.0v1	AUGUSTUS	exon	425	1828	1	+	.	transcript_id "g18530";	distance:887

I don't know how to interpret this result, or what process to follow to continue.
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@fanch1122