use kronecker product when checking vhar stable #44
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| on: | |
| push: | |
| branches: [main, master, 'hotfix/*', 'release/*', develop, 'feature/py-*'] | |
| pull_request: | |
| branches: [main, master, 'hotfix/*', 'release/*', develop] | |
| name: py-wheel-check | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, windows-latest, macos-latest] | |
| python-version: ['3.10', '3.11', '3.12'] | |
| defaults: | |
| run: | |
| working-directory: python | |
| name: ${{ matrix.os }} (${{ matrix.python-version }}) | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set system dependencies on Linux | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libboost-all-dev libeigen3-dev | |
| echo $(sudo apt list --installed) | |
| echo "EIGEN_INCLUDE_DIR=/usr/include/eigen3" >> $GITHUB_ENV | |
| echo "BOOST_INCLUDE_DIR=/usr/include/boost" >> $GITHUB_ENV | |
| - name: Set system dependencies on macOS | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew update | |
| brew install llvm libomp boost eigen | |
| EIGEN_LOC=$(brew --prefix eigen) | |
| BOOST_LOC=$(brew --prefix boost) | |
| LLVM_LOC=$(brew --prefix llvm) | |
| OMP_LOC=$(brew --prefix libomp) | |
| echo "EIGEN_INCLUDE_DIR=$EIGEN_LOC/include/eigen3" >> $GITHUB_ENV | |
| echo "BOOST_INCLUDE_DIR=$BOOST_LOC/include" >> $GITHUB_ENV | |
| echo "LLVM_LOC=$LLVM_LOC" >> $GITHUB_ENV | |
| echo "OMP_LOC=$OMP_LOC" >> $GITHUB_ENV | |
| echo "CC=$LLVM_LOC/bin/clang" >> $GITHUB_ENV | |
| echo "CXX=$LLVM_LOC/bin/clang++" >> $GITHUB_ENV | |
| echo "CPPFLAGS=-I$LLVM_LOC/include -I$OMP_LOC/include" >> $GITHUB_ENV | |
| echo "LDFLAGS=-L$LLVM_LOC/lib -L$OMP_LOC/lib" >> $GITHUB_ENV | |
| - name: Set system dependencies on Windows | |
| if: runner.os == 'Windows' | |
| run: | | |
| choco install eigen -y --no-progress | |
| choco install boost-msvc-14.3 -y --no-progress | |
| $eigenPath = ( | |
| Get-ChildItem -Path "C:\ProgramData\chocolatey\lib\eigen" -Recurse -Filter "Eigen" | | |
| Select-Object -First 1 | |
| ).Parent.FullName | |
| if ($eigenPath) { | |
| echo "eigen is installed in $eigenPath" | |
| } else { | |
| Write-Error "Wrong eigen path" | |
| exit 1 | |
| } | |
| $boostPath = $null | |
| $boostCand = @("C:\local", "C:\ProgramData\chocolatey\lib") | |
| foreach ($cand in $boostCand) { | |
| $isPath = ( | |
| Get-ChildItem -Path $cand -Directory | | |
| Where-Object { $_.Name -match "boost" } | | |
| Sort-Object LastWriteTime -Descending | | |
| Select-Object -First 1 | |
| ).FullName | |
| if ($isPath) { | |
| $boostPath = $isPath | |
| break | |
| } | |
| } | |
| if ($boostPath) { | |
| echo "boost is installed in $boostPath" | |
| } else { | |
| Write-Error "Wrong boost path" | |
| exit 1 | |
| } | |
| echo "EIGEN_INCLUDE_DIR=$eigenPath" >> $Env:GITHUB_ENV | |
| echo "BOOST_INCLUDE_DIR=$boostPath" >> $Env:GITHUB_ENV | |
| - name: Verify Eigen and boost on non-Windows | |
| if: runner.os != 'Windows' | |
| run: | | |
| ls ${{ env.EIGEN_INCLUDE_DIR }} | |
| ls ${{ env.BOOST_INCLUDE_DIR }} | |
| - name: Verify Eigen and boost on Windows | |
| if: runner.os == 'Windows' | |
| run: | | |
| dir ${{ env.EIGEN_INCLUDE_DIR }} | |
| dir ${{ env.BOOST_INCLUDE_DIR }} | |
| - name: Install requirements | |
| run: | | |
| pip install --upgrade pip | |
| pip install -r requirements/requirements.txt | |
| - name: Verify pip | |
| run: pip list | |
| - name: Build wheel | |
| run: | | |
| pip install build | |
| python -m build --wheel . | |
| - name: Install wheel on non-Windows | |
| if: runner.os != 'Windows' | |
| run: pip install dist/*.whl | |
| - name: Install wheel on Windows | |
| if: runner.os == 'Windows' | |
| run: | | |
| $whl = (Get-ChildItem -Path dist -Filter "*.whl" | Select-Object -First 1).FullName | |
| pip install $whl | |
| - name: Verify installation | |
| run: pip list | |
| - name: OpenMP check | |
| run: python -c "from bvhar.utils import checkomp; checkomp.check_omp()" | |
| - name: Test | |
| run: pytest |