Merge branch 'feature/fix-predmcmc' into develop #48
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| on: | |
| push: | |
| branches: [main, master, 'hotfix/*', 'release/*', develop, 'feature/py-*'] | |
| pull_request: | |
| branches: [main, master, 'hotfix/*', 'release/*', develop] | |
| name: py-wheel-check | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, windows-latest, macos-latest] | |
| python-version: ['3.10', '3.11', '3.12'] | |
| defaults: | |
| run: | |
| working-directory: python | |
| name: ${{ matrix.os }} (${{ matrix.python-version }}) | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set system dependencies on Linux | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libboost-all-dev libeigen3-dev | |
| echo $(sudo apt list --installed) | |
| echo "EIGEN_INCLUDE_DIR=/usr/include/eigen3" >> $GITHUB_ENV | |
| echo "BOOST_INCLUDE_DIR=/usr/include/boost" >> $GITHUB_ENV | |
| - name: Set system dependencies on macOS | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew update | |
| brew install llvm libomp boost eigen | |
| EIGEN_LOC=$(brew --prefix eigen) | |
| BOOST_LOC=$(brew --prefix boost) | |
| LLVM_LOC=$(brew --prefix llvm) | |
| OMP_LOC=$(brew --prefix libomp) | |
| echo "EIGEN_INCLUDE_DIR=$EIGEN_LOC/include/eigen3" >> $GITHUB_ENV | |
| echo "BOOST_INCLUDE_DIR=$BOOST_LOC/include" >> $GITHUB_ENV | |
| echo "LLVM_LOC=$LLVM_LOC" >> $GITHUB_ENV | |
| echo "OMP_LOC=$OMP_LOC" >> $GITHUB_ENV | |
| echo "CC=$LLVM_LOC/bin/clang" >> $GITHUB_ENV | |
| echo "CXX=$LLVM_LOC/bin/clang++" >> $GITHUB_ENV | |
| echo "CPPFLAGS=-I$LLVM_LOC/include -I$OMP_LOC/include" >> $GITHUB_ENV | |
| echo "LDFLAGS=-L$LLVM_LOC/lib -L$OMP_LOC/lib" >> $GITHUB_ENV | |
| - name: Set system dependencies on Windows | |
| if: runner.os == 'Windows' | |
| run: | | |
| choco install eigen -y --no-progress | |
| choco install boost-msvc-14.3 -y --no-progress | |
| $eigenPath = ( | |
| Get-ChildItem -Path "C:\ProgramData\chocolatey\lib\eigen" -Recurse -Filter "Eigen" | | |
| Select-Object -First 1 | |
| ).Parent.FullName | |
| if ($eigenPath) { | |
| echo "eigen is installed in $eigenPath" | |
| } else { | |
| Write-Error "Wrong eigen path" | |
| exit 1 | |
| } | |
| $boostPath = $null | |
| $boostCand = @("C:\local", "C:\ProgramData\chocolatey\lib") | |
| foreach ($cand in $boostCand) { | |
| $isPath = ( | |
| Get-ChildItem -Path $cand -Directory | | |
| Where-Object { $_.Name -match "boost" } | | |
| Sort-Object LastWriteTime -Descending | | |
| Select-Object -First 1 | |
| ).FullName | |
| if ($isPath) { | |
| $boostPath = $isPath | |
| break | |
| } | |
| } | |
| if ($boostPath) { | |
| echo "boost is installed in $boostPath" | |
| } else { | |
| Write-Error "Wrong boost path" | |
| exit 1 | |
| } | |
| echo "EIGEN_INCLUDE_DIR=$eigenPath" >> $Env:GITHUB_ENV | |
| echo "BOOST_INCLUDE_DIR=$boostPath" >> $Env:GITHUB_ENV | |
| - name: Verify Eigen and boost on non-Windows | |
| if: runner.os != 'Windows' | |
| run: | | |
| ls ${{ env.EIGEN_INCLUDE_DIR }} | |
| ls ${{ env.BOOST_INCLUDE_DIR }} | |
| - name: Verify Eigen and boost on Windows | |
| if: runner.os == 'Windows' | |
| run: | | |
| dir ${{ env.EIGEN_INCLUDE_DIR }} | |
| dir ${{ env.BOOST_INCLUDE_DIR }} | |
| - name: Install requirements | |
| run: | | |
| pip install --upgrade pip | |
| pip install -r requirements/requirements.txt | |
| - name: Verify pip | |
| run: pip list | |
| - name: Build wheel | |
| run: | | |
| pip install build | |
| python -m build --wheel . | |
| - name: Install wheel on non-Windows | |
| if: runner.os != 'Windows' | |
| run: pip install dist/*.whl | |
| - name: Install wheel on Windows | |
| if: runner.os == 'Windows' | |
| run: | | |
| $whl = (Get-ChildItem -Path dist -Filter "*.whl" | Select-Object -First 1).FullName | |
| pip install $whl | |
| - name: Verify installation | |
| run: pip list | |
| - name: OpenMP check | |
| run: python -c "from bvhar.utils import checkomp; checkomp.check_omp()" | |
| - name: Test | |
| run: pytest |