Calculate colocalisation of particles detected in two imaging channels.
The development of this project has stopped. The function of this project would be later included in DiffractionLimitedAnalysis.
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Python 3 (tested with Python 3.6-3.9)
- os
- subprocess
- re
- pandas
- tqdm
Change the data path and fiji path in the CoincidenceAnalysis.py and run in cmd. Modify the conditions of image selection and parameters for particle localisation based on your own requirements.