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  • Whitehead Institute
  • Cambridge
  • X @sclerei

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@ZhuangLab @mcb111

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  1. ImageAnalysis3 ImageAnalysis3 Public

    Image analysis scripts for conventional DNA and RNA FISH imaging

    Python 4 3

  2. MERlin MERlin Public

    Forked from emanuega/MERlin

    MERlin is an extensible analysis pipeline applied to decoding MERFISH data

    Python 2 2

  3. ChromAn ChromAn Public

    Chromatin analysis pipline in Zhuang lab

    Shell

  4. MerScope01 MerScope01 Public

    Merfish microscope master repository

    Jupyter Notebook

  5. MERFISH_probe_design MERFISH_probe_design Public

    Forked from xingjiepan/MERFISH_probe_design

    A python3 pipeline for MERFISH probe design.

    Jupyter Notebook

  6. Weissman_MERFISH_Scripts Weissman_MERFISH_Scripts Public

    Jupyter scripts for MERFISH imaging in Weissman and Zhuang lab

    Jupyter Notebook 1