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Biological Imaging Development CoLab at UCSF
- San Francisco, CA
- https://bidc.ucsf.edu/
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science-visualizingmicrovillarsearch
science-visualizingmicrovillarsearch PublicCode for Science publication
MATLAB 1
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Global-Surface-Curvature-Mean
Global-Surface-Curvature-Mean PublicThis function evaluates curvature of a surface by making spots at each vertex and calculating curvature of these spots with respect to their neighbors. The function was developed in collaborat…
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Plot-Tracks-From-A-Common-Origin
Plot-Tracks-From-A-Common-Origin PublicThis Imaris extension takes the tracked objects in Imaris and plots their respective 3-D paths from a common origin.
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Create-Spots-From-Text
Create-Spots-From-Text PublicCreates an Imaris spots object from x,y,z-positions in a CSV file. The spots size is determined by the user. Positions must be within the image boundary, for example, no negative values. Additional…
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Surface2SurfaceDists_NNeighbors
Surface2SurfaceDists_NNeighbors PublicSurface2SurfaceDists_NNeighbors is an Imaris extension that calculates the distances from every surface within a Surface object (reference surface) to every surface within a different Surface Objec…
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