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Manually install vtk 9.3.1 to workaround issue in Ubuntu's version #163

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merged 2 commits into from
Oct 9, 2024
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Manually install vtk 9.3.1 to workaround issue in Ubuntu's version #163

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a32ca4c
manually install vtk 9.3.1 to workaround issue in Ubuntu's version
sloriot Oct 8, 2024
8dec02f
also install itk
sloriot Oct 9, 2024
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34 changes: 32 additions & 2 deletions Ubuntu/Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ RUN apt-get update && DEBIAN_FRONTEND=noninteractive apt-get install -y \
libmpfr-dev zlib1g-dev \
libeigen3-dev libipe-dev \
libmpfi-dev \
libinsighttoolkit5-dev libtbb-dev git \
libtbb-dev git \
nlohmann-json3-dev \
lsb-release \
libyaml-cpp-dev \
Expand All @@ -21,7 +21,37 @@ RUN apt-get update && DEBIAN_FRONTEND=noninteractive apt-get install -y \
qt6-declarative-dev \
libqt6opengl6-dev \
libqt6svg6-dev \
libqt6websockets6-dev
libqt6websockets6-dev \
wget

#install vtk 9.3 to work around an issue in vtk 9.3.1
RUN wget https://www.vtk.org/files/release/9.3/VTK-9.3.1.tar.gz \
&& tar xf VTK-9.3.1.tar.gz \
&& cd VTK-9.3.1 \
&& sed -i 's/_M_chilren/m_children/g' /VTK-9.3.1/Utilities/octree/octree/octree_node.txx \
&& mkdir build \
&& cd build/ \
&& cmake -DCMAKE_BUILD_TYPE=Release .. \
&& make -j "$(nproc)" \
&& make install \
&& cd ../.. \
&& rm -rf VTK-9.3.1 \
&& rm VTK-9.3.1.tar.gz

#manually install ITK compiled with our vtk version
RUN wget https://github.com/InsightSoftwareConsortium/ITK/releases/download/v5.3.0/InsightToolkit-5.3.0.tar.gz \
&& tar xf InsightToolkit-5.3.0.tar.gz \
&& cd InsightToolkit-5.3.0 \
&& mkdir build \
&& cd build/ \
&& cmake -DCMAKE_BUILD_TYPE=Release .. \
&& sed -i '1 i\#include <stdint.h>' /InsightToolkit-5.3.0/Modules/Core/Common/include/itkFloatingPointExceptions.h \
&& sed -i '1 i\#include <stdint.h>' /InsightToolkit-5.3.0/Modules/Filtering/MathematicalMorphology/include/itkMathematicalMorphologyEnums.h \
&& make -j "$(nproc)" \
&& make install \
&& cd ../.. \
&& rm InsightToolkit-5.3.0 -r \
&& rm InsightToolkit-5.3.0.tar.gz

RUN git clone https://github.com/STORM-IRIT/OpenGR.git --depth 1 \
&& cd ./OpenGR \
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