Shared signatures and divergence in skin microbiomes of children with atopic dermatitis and their caregivers

Files and scripts to generate figures for the manuscript titled "Shared signatures and divergence in skin microbiomes of children with atopic dermatitis and their adult caregivers", published in the Journal of Allergy and Clinical Immunology: https://www.jacionline.org/article/S0091-6749(22)00345-1/fulltext

Raw sequencing data has been uploaded to the European Nucleotide Archive (ENA), under study accession number PRJEB42399. Metadata linking ENA accession numbers to internal sample IDs can be downloaded here

To run the scripts, clone this repository and specify working directory to the scripts/ subfolder using here:here() in R or open the project using the .Rproj file