v4.1.2

What's Changed

• Do grid detection in Artemis by @DominicOram in #670
• Fix VDS bit depth issue by @dperl-dls in #637
• Correct motor positions in nexus file by @noemifrisina in #599
• Use xray centring OAV params when doing an xray centre by @DominicOram in #666
• Unpin nexgen by @noemifrisina in #667
• Created a more generic callback structure to more easily allow different plans by @DominicOram in #669
• Tidy up device creation for full grid scan by @DominicOram in #661
• Delete logging handlers in global test teardown by @dperl-dls in #675

Full Changelog: v4.1.1...v4.1.2

v4.1.1

What's Changed

• Tidy OAV code to be able to do grid detection and compare with GDA results by @dperl-dls in #584
• Run the eiger without setting number of triggers by @DominicOram in #641
• Remove Unused EigerTriggerNumber by @DominicOram in #639
• Fix issue with zocalo errors on v4.0.0 by @DominicOram in #640
• Move more logging into dodal by @DominicOram in #626
• skip broken logging tests by @dperl-dls in #649

Full Changelog: v4.0.1...v4.1.1

v4.0.1

Bugfix: skip broken logging tests

v4.0.0

What's Changed

• Major Refactor parameter processing by @dperl-dls in #601
• Force us to use a local version of dodal in dev by @DominicOram in #581
• Added basic deploy script by @DominicOram in #466
• Add reminder to PR template by @dperl-dls in #587
• Update pixels_per_micron to microns_per_pixel by @NeilSmithDLS in #591
• Fix type hints and params by @dperl-dls in #585
• Actually check the state of Artemis when running by @DominicOram in #568
• Add single trigger mode to Eiger in preperation for rotation scans by @dperl-dls in #592
• Update environment variables to more easily use s03 by @dperl-dls in #566
• Adds flag to skip startup connection scripts by @olliesilvester in #602
• Update README.md by @anabeel011 in #605
• Improve dodal and its use in Artemis by @dperl-dls in #595
• Send aperture back to gda by @dperl-dls in #613
• Tidy up run_artemis - Removed deployment, improved help, tidier arguments by @olliesilvester in #611
• Remove duplicate aperturescatterguard system test by @dperl-dls in #619
• Added error message and logging for invalid json parameters, and tests by @olliesilvester in #609
• Move more logging into dodal by @DominicOram in #626

New Contributors

• @olliesilvester made their first contribution in #602
• @anabeel011 made their first contribution in #605

Full Changelog: v3.0.0...v4.0.0

v3.0.0

What's Changed

• Major: Move devices into dodal by @noemifrisina in #517

• Log parameters sent to Artemis better by @dperl-dls in #552

• Add a test to confirm order of zocalo end call vs disarming detector by @DominicOram in #553

• Stops unit tests pushing to real graylog by @DominicOram in #557

• Collection of minor issues found from testing v2.0.0 by @DominicOram in #555

• Remove a file that was accidentally re-added by @DominicOram in #563

• Set up dev tools to more easily work with dodal by @DominicOram in #564

• Make sure fake zocalo, used for developer testing, is tidied up well by @DominicOram in #562

Full Changelog: v2.0.0...v3.0.0

v2.0.0

What's Changed

• Major: Refactor parameters and combine registry and type constants by @dperl-dls in #522. Note that this is quite a large behind-the-scenes change that will require changes to how GDA is calling Artemis. Whilst it doesn't provide immediate benefit it is required for rotation scan work.

• Zocalo will now timeout if no results are recieved - Additionally tidies up some tests by @DominicOram in #548

• Add multi crystals to ispyb comment by @noemifrisina in #533

• Calculations and run plan for OAV loop centring by @evalott100 in #456

• Added link to collision docs in code by @DominicOram in #543

• Add some docs around github actions by @DominicOram in #531

• Altered slit gaps to specify s4 by @npat113 in #470

• Setup zebra for rotation by @dperl-dls in #546

• Add data collection group id to logs by @DominicOram in #549

Note c4060a3 is on the beamline but not in these release, it should be cherry-picked on

Full Changelog: v1.0.2...v2.0.0

v1.0.2

What's Changed

• Tell Zocalo to no longer wait on run status by @DominicOram in #519
• Choose aperture based on xtal size by @dperl-dls in #521
• Trigger zocalo after eiger has staged by @DominicOram in #537
• Improve and test aperture switching by @dperl-dls in #534
• Bump isort version by @noemifrisina in #532
• Adds script to make it easier to test when there is no beam by @DominicOram in #529

Full Changelog: v1.0.1...v1.0.2

v1.0.1

What's Changed

• Don't trigger zocalo if scan invalid and give better message in ispyb in this case by @dperl-dls in #467
• Restore writing the analysis time to comments by @dperl-dls in #511
• Improve logging to ispyb when there is no diffraction by @dperl-dls in #515
• Add beamline field to graylog by @DominicOram in #491
• Get OAV allowed zoom levels from PVs by @noemifrisina in #473
• Fix tests for initialising eiger by @dperl-dls in #508

Full Changelog: v1.0.0-rc2...v1.0.1

Fixes to 1.0.0-rc1 from beamline testing

Issues identified in testing on 26/01/23 should be fixed here.

What's Changed

• (#503) Exceptions inside receive_results are now re-raised by @DominicOram in #504
• 501 zocalo empty list by @DominicOram in #505
• 436 no longer clean unused links by @dperl-dls in #506
• 480 better status logging by @dperl-dls in #495

Full Changelog: v1.0.0-rc1...v1.0.0-rc2

Minimum requirements for testing multi-crystal zocalo

What's Changed

• Add pre-commit hooks by @graeme-winter in #4
• MXGDA-3723: Added the MVP implementation of a Zebra by @DominicOram in #1
• MXDGA-3724: Added the MVP for the fast grid scan motion by @DominicOram in #2
• 6: Added pyepics to pipfile by @DominicOram in #7
• MXGDA-3722 Ophyd implementation of an Eiger detector by @bentom08 in #3
• 8: Expand fgs system tests by @DominicOram in #9
• Fixes #18 add wait for meta filewriter to be ready by @bentom08 in #23
• added more comprehensive error message for node error check by @bentom08 in #22
• 25: Correctly set filenames on ODIN to avoid doubly setting them by @DominicOram in #26
• Mxgda 3733: Minimal gridscan plan by @DominicOram in #15
• fix zebra config to work on i03 by @bentom08 in #24
• MXGDA 3762: Created a dummy flask server for basic comms with GDA by @DominicOram in #21
• Mxgda 3764: Run plan from flask server by @DominicOram in #28
• 33: Set a hostname to be externally visible for testing by @DominicOram in #37
• 40: Added code to trigger analysis and associated tests by @DominicOram in #41
• Add ispyb functionality by @bentom08 in #39
• add put for the meta filename back in by @bentom08 in #38
• Add vscode settings to automatically format etc. by @DominicOram in #47
• 55: Run black on codebase to format by @DominicOram in #56
• 50: Fixed passing detector parameters to eiger by @DominicOram in #51
• 65: Put artemis in ISPyB comments by @DominicOram in #70
• Added CI for running unit tests by @DominicOram in #48
• 60 store position table correctly by @bentom08 in #74
• Mxgda 3734: Create nexus file by @DominicOram in #52
• 76: Added lenient codecov by @DominicOram in #89
• 34 grid scan complete fails by @DominicOram in #75
• 80: Fix zocalo parameters by @DominicOram in #81
• 82 write master file by @DominicOram in #86
• 59: Set nexus pixels correctly based on ROI by @DominicOram in #95
• 64: Call zocalo and ISPyB as part of the plan by @DominicOram in #78
• 62: Allow GDA to send filename and prefix separately by @DominicOram in #90
• Updated ophyd to master by @DominicOram in #109
• 30: 3d grid scans by @DominicOram in #104
• 61: Correctly cast data to get in ispyb by @DominicOram in #105
• 98 convert grid positions to motor positions by @DominicOram in #108
• 83: Account for no sample id by @DominicOram in #85
• #117: Created device for backlight and start of snapshot plan by @ndg63276 in #120
• #118: Create device for aperture motors and add to snapshot plan by @ndg63276 in #121
• #136 Add matplotlib to pipfile by @ndg63276 in #137
• #122: Created contributing file by @DominicOram in #123
• 97: Added function to wait for analysis results by @DominicOram in #110
• 99: ispyb requirements for 3D scans by @bentom08 in #103
• 125 get undulator gap by @MattPrit in #139
• Minor addition to contributing file by @MattPrit in #143
• 141 Add test for fast_grid_scan_plan zocalo interactions by @bentom08 in #150
• Store 2 sets of snapshots for 3d scans by @bentom08 in #142
• 126 ophyd get synchrotron mode by @abbiemery in #153
• #116: Change sam_{x,y,z} units to um by @MattPrit in #151
• 140 slit gaps using ophyd by @abbiemery in #156
• 138 create example json by @MattPrit in #148
• Fix pre-commit by @MattPrit in #159
• 102: Added code to handle datasets spread over multiple h5 files by @DominicOram in #106
• 93 atomic nexus updates by @MattPrit in #149
• Upgraded python version by @DominicOram in #160
• (#169) Ensure new instances of FullParameters are copies by @DominicOram in #170
• 124 snapshots ophyd device for oav by @MattPrit in #173
• Startup bash script for deploying, stopping and starting Artemis by @bentom08 in #176
• #179: Index list returned from zocalo by @DominicOram in #180
• (#165) Created a composite device that we can wait on for connection by @DominicOram in #167
• #181: Change setup to package format by @abbiemery in #190
• Edit config files so that the correct coverage reports are produced by @MattPrit in #194
• 49: move to position from analysis by @DominicOram in #112
• Fix build system by @MattPrit in #195
• Updated to latest nexgen API by @DominicOram in #162
• reverse zocalo coordinates and use centre_of_mass rather than max_voxel by @bentom08 in #199
• #94: Add tests for eiger.py by @MattPrit in #192
• 174 merge nexus test fixtures by @MattPrit in #182
• #209: Added simple tests for various devices by @DominicOram in #210
• 128 overlay grid on the oav by @MattPrit in #183
• (#171) Added flake8 options and added to CI by @DominicOram in #172
• Remove use of src in imports by @DominicOram in #214
• 206: Ensure directory from GDA is correct by @DominicOram in #213
• Change Underload to zero in nexus file by @bentom08 in #202
• Use artemis-specific zocalo environment by @rjgildea in #203
• 29 filepath for lookuptable by @abbiemery in #216
• Fix file path error by @abbiemery in #223
• #145: synchrotron simulation for system tests by @abbiemery in #215
• #146: Test that undulator can connect to simulation by @MattPrit in #201
• 27 integrate with graylog by @abbiemery in #218
• #77: Inform ISpyB if scan fails by @MattPrit in #186
• Do Image recognition for both omega rotations in a 3D scan by @bentom08 in #157
• Set correct Odin PVs and wait for filename to propagate to meta writer by @bentom08 in https://github.com/DiamondL...