Merge pull request #75 from sundarvenkata-EBI/fix/eva2861_remediate_d…

…uplicate_dbsnp_ss EVA-2889 - SS_SPLIT event
EBIvariation · Jun 20, 2022 · 029409d · 029409d
2 parents 3b427cc + ff7559e
commit 029409d
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Showing 2 changed files with 12 additions and 2 deletions.
diff --git a/...-commons-core/src/main/java/uk/ac/ebi/ampt2d/commons/accession/core/models/EventType.java b/...-commons-core/src/main/java/uk/ac/ebi/ampt2d/commons/accession/core/models/EventType.java
@@ -42,5 +42,11 @@ public enum EventType {
     DEPRECATED,
 
     // RS ID was back-propagated from a remapped assembly
-    RS_BACK_PROPAGATED
+    RS_BACK_PROPAGATED,
+
+    // Candidates for SS ID split
+    SS_SPLIT_CANDIDATES,
+
+    // new SS ID created because of SS split - as a result of processing SS_SPLIT_CANDIDATES
+    SS_SPLIT
 }
diff --git a/...n/java/uk/ac/ebi/ampt2d/commons/accession/persistence/mongodb/document/EventDocument.java b/...n/java/uk/ac/ebi/ampt2d/commons/accession/persistence/mongodb/document/EventDocument.java
@@ -69,7 +69,7 @@ public void fill(EventType eventType, ACCESSION accessionIdOrigin, ACCESSION acc
                      String reason, List<INACTIVE_DOCUMENT> inactiveObjects) {
         this.eventType = eventType;
         this.accession = accessionIdOrigin;
-        if(eventType==EventType.RS_SPLIT){
+        if(eventType==EventType.RS_SPLIT || eventType == EventType.SS_SPLIT) {
             this.splitInto = accessionIdDestiny;
         }else if(eventType==EventType.MERGED){
             this.mergeInto = accessionIdDestiny;
@@ -133,6 +133,10 @@ public String getId() {
         return id;
     }
 
+    public void setId(String id) {
+        this.id = id;
+    }
+
     @Override
     public boolean isNew() {
         return true;