Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

EVA-3695 Save validation results in a separate yaml file #67

Merged
merged 5 commits into from
Nov 15, 2024

Conversation

nitin-ebi
Copy link
Collaborator

No description provided.

@nitin-ebi nitin-ebi self-assigned this Nov 15, 2024
eva_sub_cli/validators/validator.py Outdated Show resolved Hide resolved
eva_sub_cli/validators/validator.py Outdated Show resolved Hide resolved
eva_sub_cli/validators/validator.py Outdated Show resolved Hide resolved
Copy link
Member

@tcezard tcezard left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Looks good. Couple of comments you can address at your leasure

# vcf_check result
vcf_check_result = all((vcf_check.get('critical_count', 1) == 0
for vcf_name, vcf_check in self.results.get('vcf_check', {}).items()))
self.results['vcf_check']['PASS'] = vcf_check_result
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

personal preference I guess but I would prefer lower case pass key.

Copy link
Collaborator Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

done

eva_sub_cli/validators/validator.py Outdated Show resolved Hide resolved
@nitin-ebi nitin-ebi merged commit 4c37d99 into EBIvariation:main Nov 15, 2024
1 check passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants