remove slow test

EBIvariation · Oct 7, 2021 · 48e3531 · 48e3531
1 parent 3885481
commit 48e3531
Showing 1 changed file with 14 additions and 13 deletions.
diff --git a/tests/test_vep_utils.py b/tests/test_vep_utils.py
@@ -71,19 +71,20 @@ def test_get_vep_versions_from_ensembl_not_found(self):
         self.assertEqual(vep_version, None)
         self.assertEqual(cache_version, None)
 
-    def test_get_vep_versions_from_ensembl_older_version(self):
-        # Older version of assembly using NCBI assembly code isn't found successfully
-        # TODO this takes about 20 minutes to finish when I test locally
-        vep_version, cache_version = get_vep_and_vep_cache_version_from_ensembl('eva_pfalciparum_asm276v1', 36329,
-                                                                                'GCA_000002765')
-        self.assertEqual(vep_version, None)
-        self.assertEqual(cache_version, None)
-
-        # If we magically knew the Ensembl assembly code was EPr1 we could find it!
-        vep_version, cache_version = get_vep_and_vep_cache_version_from_ensembl('eva_pfalciparum_EPr1', 36329,
-                                                                                'GCA_000002765')
-        self.assertEqual(vep_version, 44 + 53)
-        self.assertEqual(cache_version, 44)
+    # DISABLED because too slow and make deployment difficult.
+    # def test_get_vep_versions_from_ensembl_older_version(self):
+    #     # Older version of assembly using NCBI assembly code isn't found successfully
+    #     # TODO this takes about 20 minutes to finish when I test locally
+    #     vep_version, cache_version = get_vep_and_vep_cache_version_from_ensembl('eva_pfalciparum_asm276v1', 36329,
+    #                                                                             'GCA_000002765')
+    #     self.assertEqual(vep_version, None)
+    #     self.assertEqual(cache_version, None)
+    #
+    #     # If we magically knew the Ensembl assembly code was EPr1 we could find it!
+    #     vep_version, cache_version = get_vep_and_vep_cache_version_from_ensembl('eva_pfalciparum_EPr1', 36329,
+    #                                                                             'GCA_000002765')
+    #     self.assertEqual(vep_version, 44 + 53)
+    #     self.assertEqual(cache_version, 44)
 
     def test_get_vep_versions(self):
         with patch('eva_submission.vep_utils.get_vep_and_vep_cache_version_from_db') as m_get_db, \