search the eload folder during QC

EBIvariation · Nov 5, 2024 · 58b0efd · 58b0efd
1 parent fd5069d
commit 58b0efd
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/eva_submission/submission_qc_checks.py b/eva_submission/submission_qc_checks.py
@@ -115,6 +115,9 @@ def __init__(self, eload_number, config_object: EloadConfig = None):
         self.project_accession = self.eload_cfg.query('brokering', 'ena', 'PROJECT')
         self.path_to_data_dir = Path(cfg['projects_dir'], self.project_accession)
         self.path_to_logs_dir = os.path.join(self.path_to_data_dir, '00_logs')
+        # If the project folder does not exist then it is located in the eload folder
+        if not os.path.exists(self.path_to_logs_dir):
+            self.path_to_logs_dir = os.path.join(self.eload_dir, '00_logs')
         self.taxonomy = self.eload_cfg.query('submission', 'taxonomy_id')
         self.analyses = self.eload_cfg.query('brokering', 'analyses')