EVA-3662 - Enable build with dynamically linked dependencies #73
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Build | |
| on: | |
| pull_request: | |
| branches: | |
| - master | |
| push: | |
| branches: | |
| - master | |
| tags: | |
| - '*' | |
| jobs: | |
| ### Linux build | |
| linux_build: | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| config: | |
| - {cc: "gcc", cxx: "g++"} | |
| - {cc: "clang-10", cxx: "clang++-10"} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Install dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install cmake wget build-essential | |
| ./install_dependencies.sh linux | |
| - name: Compile and test | |
| run: | | |
| mkdir build && cd build && cmake -G "Unix Makefiles" -DCMAKE_CXX_COMPILER=${{ matrix.config.cxx }} -DCMAKE_C_COMPILER=${{ matrix.config.cc }} -DSTATIC_BUILD=1 .. | |
| make -j2 | |
| cd .. && ./build/bin/test_validation_suite | |
| - name: Rename release files | |
| if: ${{ matrix.config.cc == 'gcc' }} | |
| run: | | |
| mv build/bin/vcf_validator vcf_validator_linux | |
| mv build/bin/vcf_assembly_checker vcf_assembly_checker_linux | |
| - name: Upload vcf-validator | |
| uses: actions/upload-artifact@v3 | |
| if: ${{ matrix.config.cc == 'gcc' }} | |
| with: | |
| name: vcf_validator_linux | |
| path: vcf_validator_linux | |
| - name: Upload vcf-assembly-checker | |
| uses: actions/upload-artifact@v3 | |
| if: ${{ matrix.config.cc == 'gcc' }} | |
| with: | |
| name: vcf_assembly_checker_linux | |
| path: vcf_assembly_checker_linux | |
| ### Mac OS build intel | |
| macos_build_intel: | |
| runs-on: macos-12 | |
| strategy: | |
| matrix: | |
| config: | |
| - {cc: "gcc", cxx: "g++"} | |
| - {cc: "clang", cxx: "clang++"} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Install dependencies | |
| run: | | |
| #brew update | |
| HOMEBREW_NO_AUTO_UPDATE=1 brew install boost automake | |
| ./install_dependencies.sh osx | |
| - name: Compile and test | |
| run: | | |
| mkdir build && cd build && cmake -G "Unix Makefiles" -DCMAKE_CXX_COMPILER=${{ matrix.config.cxx }} -DCMAKE_C_COMPILER=${{ matrix.config.cc }} .. | |
| export LIBRARY_PATH=${LIBRARY_PATH}:/usr/local/opt/icu4c/lib:/usr/local/lib | |
| make -j2 | |
| cd .. && ./build/bin/test_validation_suite | |
| - name: Rename release files | |
| if: ${{ matrix.config.cc == 'clang' }} | |
| run: | | |
| mv build/bin/vcf_validator vcf_validator_macos_x64 | |
| mv build/bin/vcf_assembly_checker vcf_assembly_checker_macos_x64 | |
| - name: Upload vcf-validator | |
| uses: actions/upload-artifact@v3 | |
| if: ${{ matrix.config.cc == 'clang' }} | |
| with: | |
| name: vcf_validator_macos_x64 | |
| path: vcf_validator_macos_x64 | |
| - name: Upload vcf-assembly-checker | |
| uses: actions/upload-artifact@v3 | |
| if: ${{ matrix.config.cc == 'clang' }} | |
| with: | |
| name: vcf_assembly_checker_macos_x64 | |
| path: vcf_assembly_checker_macos_x64 | |
| ### Mac OS build arm | |
| macos_build_arm: | |
| runs-on: macos-14 | |
| strategy: | |
| matrix: | |
| config: | |
| - {cc: "gcc", cxx: "g++"} | |
| - {cc: "clang", cxx: "clang++"} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Install dependencies | |
| run: | | |
| #brew update | |
| HOMEBREW_NO_AUTO_UPDATE=1 brew install boost automake libtool | |
| ./install_dependencies.sh osx | |
| - name: Compile and test | |
| run: | | |
| mkdir build && cd build && cmake -G "Unix Makefiles" -DCMAKE_CXX_COMPILER=${{ matrix.config.cxx }} -DCMAKE_C_COMPILER=${{ matrix.config.cc }} .. | |
| make -j2 | |
| cd .. && ./build/bin/test_validation_suite | |
| - name: Rename release files | |
| if: ${{ matrix.config.cc == 'clang' }} | |
| run: | | |
| mv build/bin/vcf_validator vcf_validator_macos_arm64 | |
| mv build/bin/vcf_assembly_checker vcf_assembly_checker_macos_arm64 | |
| - name: Upload vcf-validator | |
| uses: actions/upload-artifact@v3 | |
| if: ${{ matrix.config.cc == 'clang' }} | |
| with: | |
| name: vcf_validator_macos_arm64 | |
| path: vcf_validator_macos_arm64 | |
| - name: Upload vcf-assembly-checker | |
| uses: actions/upload-artifact@v3 | |
| if: ${{ matrix.config.cc == 'clang' }} | |
| with: | |
| name: vcf_assembly_checker_macos_arm64 | |
| path: vcf_assembly_checker_macos_arm64 | |
| ### Release job (tags only) | |
| create_release: | |
| if: startsWith(github.ref, 'refs/tags/') | |
| needs: [ linux_build, macos_build_intel, macos_build_arm ] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Download artifacts | |
| uses: actions/download-artifact@v3 | |
| with: | |
| path: bin | |
| - name: Draft release | |
| uses: softprops/action-gh-release@v1 | |
| with: | |
| draft: true | |
| files: ${{ github.workspace }}/bin/*/* | |
| fail_on_unmatched_files: true |