Merge branch 'master' into dev/vcf4.4

.github/workflows/build.yml

@@ -125,7 +125,6 @@ jobs:
     - name: Compile and test
       run: |
         mkdir build && cd build && cmake -G "Unix Makefiles" -DCMAKE_CXX_COMPILER=${{ matrix.config.cxx }} -DCMAKE_C_COMPILER=${{ matrix.config.cc }} ..
-        export LIBRARY_PATH=${LIBRARY_PATH}:/opt/homebrew/opt/icu4c/lib:/opt/homebrew/lib
         make -j2
         cd .. && ./build/bin/test_validation_suite
     - name: Rename release files

CMakeLists.txt

@@ -79,7 +79,7 @@ if (LINUX)
 elseif (OSX)
   # Mac build not fully static. include system libraries to be dynamic
   set (CMAKE_EXE_LINKER_FLAGS)
-  set (Boost_USE_STATIC_LIBS ON)             # only find static libs
+  set (Boost_USE_STATIC_LIBS OFF)            # use dynamically linked libraries
 elseif (WINDOWS)
   set (Boost_USE_STATIC_LIBS ON)             # only find static libs
   set (CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS_RELEASE} /MT") # also requires boost with runtime-link=static

inc/vcf/validator_detail_v41.hpp

@@ -240,7 +240,9 @@ case 1:
 #line 264 "src/vcf/vcf.ragel"
 	{
         ErrorPolicy::handle_error(*this, new MetaSectionError{n_lines,
+
                "ALT metadata ID is not prefixed by DEL/INS/DUP/INV/CNV" + (source->version < Version::v44 ? std::string("/BND") : std::string("")) + " and suffixed by ':' and a text sequence"});
+
         p--; {goto st533;}
     }
 #line 259 "src/vcf/vcf.ragel"

inc/vcf/validator_detail_v42.hpp

@@ -241,6 +241,7 @@ case 1:
 	{
         ErrorPolicy::handle_error(*this, new MetaSectionError{n_lines,
                "ALT metadata ID is not prefixed by DEL/INS/DUP/INV/CNV" + (source->version < Version::v44 ? std::string("/BND") : std::string("")) + " and suffixed by ':' and a text sequence"});
+
         p--; {goto st605;}
     }
 #line 259 "src/vcf/vcf.ragel"