Popular repositories Loading

1. cellpose cellpose Public

   a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

   Jupyter Notebook 1.4k 399

2. Kilosort Kilosort Public

   Fast spike sorting with drift correction

   Python 477 248

3. suite2p suite2p Public

   cell detection in calcium imaging recordings

   Jupyter Notebook 356 241

4. rastermap rastermap Public

   a visualization method for neural data

   Python 193 46

5. facemap facemap Public

   Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.

   Python 156 61

6. stringer-pachitariu-et-al-2018b stringer-pachitariu-et-al-2018b Public

   Responses of 10,000 neurons to 2,800 natural images

   MATLAB 68 21