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32 Open 866 Closed
32 Open 866 Closed
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Issues list

Cellpose3 running with Vizgen Post-processing Tool (VPT) enhancement New feature or request
#1053 opened Nov 14, 2024 by KunHHE
CRITICAL:cellpose.io:ERROR: could not read masks from file, can only convert an array of size 1 to a Python scalar
#1052 opened Nov 14, 2024 by jusforwork15
Still having drawing bug where masks wont actually be created once drawn
#1051 opened Nov 14, 2024 by mayishazn
5
[FEATURE] calibrate diameter with command line enhancement New feature or request
#1050 opened Nov 13, 2024 by jazberna1
Cell pose graph from plot.show_segmentation
#1048 opened Nov 12, 2024 by antopHU
RuntimeError: nonzero is not supported for tensors with more than INT_MAX elements bug Something isn't working
#1046 opened Nov 12, 2024 by Lem-P
2
segmentation of nuclei + membranes
#1043 opened Nov 7, 2024 by Kaltzisp
[BUG] Minor: Ensure to use weights_only=True for all torch.load bug Something isn't working
#1042 opened Nov 7, 2024 by ashishUthama
[BUG] normalisation problem? bug Something isn't working
#1041 opened Nov 4, 2024 by TomPJWyatt
[INSTALL] How to train the model on another annotated dataset (transfer learning) install install help
#1039 opened Nov 1, 2024 by AyaMohamedS
[BUG] Crashing during headless processing a folder of 3D z stacks bug Something isn't working
#1038 opened Oct 31, 2024 by derekthirstrup
4
[BUG] Error saving flows and cellprob tif image bug Something isn't working
#1037 opened Oct 31, 2024 by derekthirstrup
1
[BUG] Cellpose 3 using GPU macOS M1 bug Something isn't working mac mac M1/M2 issues
#1034 opened Oct 30, 2024 by AlabC
9
[BUG] Different Segementation Result between GUI and Python command bug Something isn't working
#1026 opened Oct 10, 2024 by HaofeiGe
3
[FEATURE] Output cell probability from CLI enhancement New feature or request
#1023 opened Oct 7, 2024 by cam-nowell
[BUG] No masks found during training bug Something isn't working
#1017 opened Sep 24, 2024 by nicolehmr
1
[FEATURE] maximum X,Y, Diameters, and ROIs file exported as a simple CSV enhancement New feature or request
#1016 opened Sep 24, 2024 by anas-masood
[INSTALL] This plugin does not support propagateSizeHints() install install help
#1012 opened Sep 19, 2024 by chen000701
2
[BUG] model.eval with CPU returns None if insufficient memory bug Something isn't working
#991 opened Jul 30, 2024 by nick-youngblut
4
The predictions by Command line and GUI are different
#972 opened Jul 15, 2024 by ycwei0321
19
Support for 4D+t data enhancement New feature or request
#971 opened Jul 10, 2024 by macromeer
2
[FEATURE] a separate quantification algorithm or ability to input a single x-y coordinate as the position of a cell (instead of a mask) enhancement New feature or request
#915 opened Apr 11, 2024 by tanpancodes
@mrariden
3
Allow for cell and nucleus detection enhancement New feature or request
#914 opened Apr 11, 2024 by lacan
[BUG]: Outliers in cell segmentation points (both for ['mask'] and ['outlines']) enhancement New feature or request
#887 opened Mar 6, 2024 by postnubilaphoebus
4
[FEATURE]Training in 3D - How to process 2D trainings data? enhancement New feature or request
#866 opened Feb 19, 2024 by klingann
4
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