Add a workflow to validate the ontology

PavlidisLab · Nov 26, 2023 · d8d0115 · d8d0115
1 parent 42c7548
commit d8d0115
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diff --git a/.github/workflows/validate.yml b/.github/workflows/validate.yml
@@ -0,0 +1,11 @@
+name: Validate TGEMO.OWL
+on: [push]
+jobs:
+  validate:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4.1.1
+      - name: Download ROBOT
+        run: wget -O robot.jar https://github.com/ontodev/robot/releases/download/v1.9.5/robot.jar
+      - name: Validate TGEMO.OWL
+        run: make check
diff --git a/Makefile b/Makefile
@@ -1,4 +1,11 @@
 ROBOT := java -jar robot.jar
 
+all: TGEMO.OBO
+
 TGEMO.OBO: TGEMO.OWL
 	$(ROBOT) convert --format obo --input $^ --output $@
+
+check: TGEMO.OWL
+	$(ROBOT) validate-profile --profile Full --input $^
+
+.PHONY: all check