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add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1442: Pull request #475 synchronize by tomkinsc
July 19, 2023 14:45 18m 29s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 19, 2023 14:45 18m 29s
only disable miniwdl post-execution output chown on macOS viral-pipelines CI #1441: Commit ea4f193 pushed by tomkinsc
July 19, 2023 14:45 17m 45s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 19, 2023 14:45 17m 45s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1440: Pull request #475 synchronize by tomkinsc
July 19, 2023 14:41 4m 8s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 19, 2023 14:41 4m 8s
bugfix viral-pipelines CI #1439: Commit a986189 pushed by tomkinsc
July 19, 2023 14:41 3m 43s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 19, 2023 14:41 3m 43s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1438: Pull request #475 synchronize by tomkinsc
July 19, 2023 14:38 3m 32s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 19, 2023 14:38 3m 32s
cleanup cromwell test dir on failure or exit (unless KEEP_OUTPUT=true) viral-pipelines CI #1437: Commit 64a7d73 pushed by tomkinsc
July 19, 2023 14:38 4m 9s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 19, 2023 14:38 4m 9s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1436: Pull request #475 synchronize by tomkinsc
July 19, 2023 14:29 15m 6s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 19, 2023 14:29 15m 6s
list on dockstore: fetch_sra_bams_for_genbank_accession, fetch_fasta_… viral-pipelines CI #1435: Commit e274a4f pushed by tomkinsc
July 19, 2023 14:29 17m 45s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 19, 2023 14:29 17m 45s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1434: Pull request #475 synchronize by tomkinsc
July 18, 2023 20:20 15m 37s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 20:20 15m 37s
WIP config to reduce verbosity of cromwell logging viral-pipelines CI #1433: Commit 4164239 pushed by tomkinsc
July 18, 2023 20:20 19m 4s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 20:20 19m 4s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1432: Pull request #475 synchronize by tomkinsc
July 18, 2023 17:41 19m 40s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 17:41 19m 40s
increase default mem for nextstrain_build_subsample task 50->96GB viral-pipelines CI #1431: Commit 4c8bd10 pushed by tomkinsc
July 18, 2023 17:41 20m 46s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 17:41 20m 46s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1430: Pull request #475 synchronize by tomkinsc
July 18, 2023 17:26 19m 17s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 17:26 19m 17s
chmod 644 two qiime-related WDLs viral-pipelines CI #1429: Commit 3f42c91 pushed by tomkinsc
July 18, 2023 17:26 20m 42s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 17:26 20m 42s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1428: Pull request #475 synchronize by tomkinsc
July 18, 2023 15:53 18m 35s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 15:53 18m 35s
pin quay.io/broadinstitute/qiime2 to specific build hash viral-pipelines CI #1427: Commit 50e402c pushed by tomkinsc
July 18, 2023 15:53 21m 47s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 15:53 21m 47s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1426: Pull request #475 synchronize by tomkinsc
July 18, 2023 13:49 21m 39s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 13:49 21m 39s
bump setup-buildx-action GitHub action version v1->v2 viral-pipelines CI #1425: Commit 6015636 pushed by tomkinsc
July 18, 2023 13:49 18m 11s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 13:49 18m 11s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1424: Pull request #475 synchronize by tomkinsc
July 18, 2023 13:44 22m 26s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 13:44 22m 26s
condense GitHub actions script flags viral-pipelines CI #1423: Commit d277bdd pushed by tomkinsc
July 18, 2023 13:44 22m 31s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 13:44 22m 31s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1422: Pull request #475 synchronize by tomkinsc
July 18, 2023 13:41 21m 43s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 13:41 21m 43s
do not quit commands in tasks_16S_amplicon on pipefail viral-pipelines CI #1421: Commit cc9524b pushed by tomkinsc
July 18, 2023 13:41 21m 10s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 13:41 21m 10s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1420: Pull request #475 synchronize by tomkinsc
July 18, 2023 13:34 19m 42s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 13:34 19m 42s
bump womtool and cromwell 61->85 viral-pipelines CI #1419: Commit cb69a63 pushed by tomkinsc
July 18, 2023 13:34 22m 19s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 13:34 22m 19s
add workflow: fetch_sra_bams_for_genbank_accession viral-pipelines CI #1418: Pull request #475 synchronize by tomkinsc
July 18, 2023 12:36 19m 57s ct-fetch-sra-bams-for-genbank-accession
ct-fetch-sra-bams-for-genbank-accession
July 18, 2023 12:36 19m 57s
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