[ENH] add model selection to CLI #2
Workflow file for this run
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| --- | |
| name: tests bayesian model selection | |
| # Uses the cron schedule for github actions | |
| # | |
| # https://docs.github.com/en/free-pro-team@latest/actions/reference/events-that-trigger-workflows#scheduled-events | |
| # | |
| # ┌───────────── minute (0 - 59) | |
| # │ ┌───────────── hour (0 - 23) | |
| # │ │ ┌───────────── day of the month (1 - 31) | |
| # │ │ │ ┌───────────── month (1 - 12 or JAN-DEC) | |
| # │ │ │ │ ┌───────────── day of the week (0 - 6 or SUN-SAT) | |
| # │ │ │ │ │ | |
| # │ │ │ │ │ | |
| # │ │ │ │ │ | |
| # * * * * * | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| schedule: | |
| - cron: 0 0 1,15 * * | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| jobs: | |
| tests: | |
| if: github.repository_owner == 'cpp-lln-lab' | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Install Node | |
| uses: actions/setup-node@v3 | |
| with: | |
| node-version: 18 | |
| - name: Install python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.11' | |
| - name: Install dependencies | |
| run: | | |
| sudo apt-get -y -qq update | |
| sudo apt-get install -y git-annex | |
| python -m pip install --upgrade pip setuptools | |
| pip install datalad | |
| - name: Clone bidspm | |
| uses: actions/checkout@v3 | |
| with: | |
| submodules: recursive | |
| fetch-depth: 0 | |
| - name: Get data | |
| run: make -C demos/bayes data_ds000114 | |
| - name: Install validators | |
| run: make install | |
| - name: Install SPM | |
| run: | | |
| git clone https://github.com/spm/spm12.git --depth 1 | |
| - name: Copy Macs toolbox to SPM inputs_folder | |
| run: cp -rv lib/MACS spm12/toolbox/MACS | |
| - name: Install MATLAB | |
| uses: matlab-actions/setup-matlab@v1.2.4 | |
| with: | |
| release: R2022b | |
| - name: Run system tests MATLAB BMS | |
| uses: matlab-actions/run-command@v1.2.1 | |
| with: | |
| command: cd(fullfile(getenv('GITHUB_WORKSPACE'), '.github', 'workflows')); run system_tests_bms}; |