Merge pull request #31 from hgb-bin-proteomics/develop

add crossplatform binaries

.github/workflows/test-macos.yml

@@ -0,0 +1,30 @@
+name: Test for macOS
+
+on:
+  push:
+    branches: [ master ]
+  pull_request:
+    branches: [ master ]
+
+jobs:
+  Test-for-macOS:
+    runs-on: macos-14
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Install NET
+        uses: actions/setup-dotnet@v4
+        with:
+          dotnet-version: '6'
+      - name: Copy test data
+        run: |
+          cp tests/data/* exe/macos_arm/uncompressed
+      - name: Test
+        run: |
+          cd exe/macos_arm/uncompressed
+          chmod +x CandidateSearch
+          ./CandidateSearch test_spectra.mgf test_database.fasta test_settings.txt
+      - name: Check result
+        run: |
+          cd exe/macos_arm/uncompressed
+          head test_spectra.mgf_results.csv

.github/workflows/test-ubuntu.yml

@@ -0,0 +1,33 @@
+name: Test for Ubuntu 22.04
+
+on:
+  push:
+    branches: [ master ]
+  pull_request:
+    branches: [ master ]
+
+jobs:
+  Test-for-Ubuntu:
+    runs-on: ubuntu-22.04
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Install NET
+        uses: actions/setup-dotnet@v4
+        with:
+          dotnet-version: '6'
+      - name: Install dependencies
+        run: |
+          sudo apt-get update && sudo apt-get install -y g++
+      - name: Copy test data
+        run: |
+          cp tests/data/* exe/ubuntu_x64/uncompressed
+      - name: Test
+        run: |
+          cd exe/ubuntu_x64/uncompressed
+          chmod +x CandidateSearch
+          ./CandidateSearch test_spectra.mgf test_database.fasta test_settings.txt
+      - name: Check result
+        run: |
+          cd exe/ubuntu_x64/uncompressed
+          head test_spectra.mgf_results.csv

.github/workflows/test-windows.yml

@@ -0,0 +1,29 @@
+name: Test for Windows
+
+on:
+  push:
+    branches: [ master ]
+  pull_request:
+    branches: [ master ]
+
+jobs:
+  Test-for-Windows:
+    runs-on: windows-2022
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Install NET
+        uses: actions/setup-dotnet@v4
+        with:
+          dotnet-version: '6'
+      - name: Copy test data
+        run: |
+          copy tests\data\* exe\windows_x64\uncompressed
+      - name: Test
+        run: |
+          cd exe/windows_x64/uncompressed
+          ./CandidateSearch test_spectra.mgf test_database.fasta test_settings.txt
+      - name: Check result
+        run: |
+          cd exe/windows_x64/uncompressed
+          Get-Content test_spectra.mgf_results.csv -TotalCount 10

docs/Doxyfile

@@ -48,7 +48,7 @@ PROJECT_NAME           = CandidateSearch
 # could be handy for archiving the generated documentation or if some version
 # control system is used.
 
-PROJECT_NUMBER         = 1.1.1
+PROJECT_NUMBER         = 1.1.2
 
 # Using the PROJECT_BRIEF tag one can provide an optional one line description
 # for a project that appears at the top of each page and should give viewer a