critical fix in the configure.sh

hillerlab · Sep 13, 2023 · bdcb5b9 · bdcb5b9
1 parent 93ca15e
commit bdcb5b9
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/configure.sh b/configure.sh
@@ -30,11 +30,11 @@ else
     CFLAGS="-Wall -Wextra -O2 -g -std=c99" # original flags for x86
 fi
 
-gcc "$CFLAGS" -o "${my_dir}"/modules/chain_score_filter "${my_dir}"/modules/chain_score_filter.c
-gcc "$CFLAGS" -o "${my_dir}"/modules/chain_filter_by_id "${my_dir}"/modules/chain_filter_by_id.c
-gcc "$CFLAGS" -fPIC -shared -o "${my_dir}"/modules/chain_coords_converter_slib.so "${my_dir}"/modules/chain_coords_converter_slib.c
-gcc "$CFLAGS" -fPIC -shared -o "${my_dir}"/modules/extract_subchain_slib.so "${my_dir}"/modules/extract_subchain_slib.c
-gcc "$CFLAGS" -fPIC -shared -o "${my_dir}"/modules/chain_bst_lib.so "${my_dir}"/modules/chain_bst_lib.c
+gcc $CFLAGS -o "${my_dir}"/modules/chain_score_filter "${my_dir}"/modules/chain_score_filter.c
+gcc $CFLAGS -o "${my_dir}"/modules/chain_filter_by_id "${my_dir}"/modules/chain_filter_by_id.c
+gcc $CFLAGS -fPIC -shared -o "${my_dir}"/modules/chain_coords_converter_slib.so "${my_dir}"/modules/chain_coords_converter_slib.c
+gcc $CFLAGS -fPIC -shared -o "${my_dir}"/modules/extract_subchain_slib.so "${my_dir}"/modules/extract_subchain_slib.c
+gcc $CFLAGS -fPIC -shared -o "${my_dir}"/modules/chain_bst_lib.so "${my_dir}"/modules/chain_bst_lib.c
 
 if ! $OVERRIDE && { [[ -f "./models/se_model.dat" ]] || [[ -f "./models/me_model.dat" ]]; }
 then