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fix: replace deprecated jax.numpy.trapz #15

Merged
merged 2 commits into from
Jun 1, 2024
Merged

fix: replace deprecated jax.numpy.trapz #15

merged 2 commits into from
Jun 1, 2024

Commits on Mar 14, 2024

  1. fix: replace deprecated jax.numpy.trapz 

    Apparently in the 0.4.16 JAX release, there were several deprecations
following NEP52
(https://numpy.org/neps/nep-0052-python-api-cleanup.html)
One of those was jax.numpy.trapz. Instead we are meant to use
jax.scipy.integrate.trapozoid.

The C. Elegans code used trapz so it is not running on the current
version.
    @alonfnt
    alonfnt committed Mar 14, 2024
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  2. build: fix packages versions and scikit-version 

    Packages requiere newer Python versions than 3.8.
But some packages are old and use deprecated features (scikit-video),
so I added a quick fix. Ideally I fix it at some point.
Some versions on requirements are also more clearly specified, as there
are other deprecations.
    @alonfnt
    alonfnt committed Mar 14, 2024
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