fix requirements and deleted unsused files

matthiasprobst · Mar 9, 2024 · f36ff37 · f36ff37
1 parent ff2bdb5
commit f36ff37
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Showing 5 changed files with 12 additions and 26 deletions.
diff --git a/requirements.txt b/requirements.txt
@@ -2,12 +2,15 @@ numpy
 pandas
 pathlib
 h5py
-xarray
-tifffile
 pyyaml
 tqdm
 matplotlib
 python-dotenv
 opencv-python
 PyQt5
-scipy
+scipy
+pivimage
+pydantic
+ontolutils
+pivmetalib @ git+https://github.com/matthiasprobst/pivmetalib
+ontolutils @ git+https://github.com/matthiasprobst/ontology-utils
diff --git a/setup.cfg b/setup.cfg
@@ -26,23 +26,24 @@ install_requires =
     numpy
     pandas
     pathlib
-    h5py
-    xarray
-    tifffile
     pyyaml
     tqdm
     matplotlib
     python-dotenv
     opencv-python
-    PyQt5
     scipy
-;     h5RDMtoolbox @ git+https://github.com/matthiasprobst/h5RDMtoolbox@main
+    pivimage
+    pydantic
+    ontolutils @ git+https://github.com/matthiasprobst/ontology-utils
+    pivmetalib @ git+https://github.com/matthiasprobst/pivmetalib
 
 [options.extras_require]
 test =
     pytest
     pytest-cov
     pylint
+gui =
+    PyQt5
 complete =
     %(test)s
 

diff --git a/synpivimage/random.py b/synpivimage/random.py
diff --git a/synpivimage/standard_name_translation.yaml b/synpivimage/standard_name_translation.yaml
diff --git a/synpivimage/synpivimage.layout b/synpivimage/synpivimage.layout