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141 Open 102 Closed
141 Open 102 Closed
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Issues list

feature request: resolve list of ontology terms
#396 opened Jul 6, 2022 by bheavner
SSL certificate for https://api.monarchinitiative.org/ set to expire on June 3rd (15 days)
#395 opened May 18, 2022 by TheMadBug
@putmantime
1
error when retrieving data for a specific id
#393 opened Apr 22, 2022 by dominickdm
1
Add general api endpoint for mapping taxon labels to ids?
#391 opened Apr 6, 2022 by vincerubinetti
@falquaddoomi
6
Text annotator data needs significant cleaning
#390 opened Mar 16, 2022 by vincerubinetti
2
"category" field in /nlp/annotate/entities is always empty
#387 opened Feb 25, 2022 by falquaddoomi
2
Include taxon id with taxon label in facet count of entity search endpoint
#386 opened Feb 22, 2022 by vincerubinetti
5
SciGraph returning incorrect text/indices on Monarch API
#385 opened Feb 16, 2022 by gaurav
Run tests on dockerized application prior to pushing to dockerhub
#383 opened Dec 17, 2021 by kshefchek
Allow biolink to boot up without a running instance of owlsim
#378 opened Aug 25, 2021 by kshefchek
1
Evidence graph is broken for publication - x associations
#376 opened Jul 30, 2021 by kshefchek
Add disease chemical data from CTD
#375 opened Jul 28, 2021 by kshefchek
Consider more proactive sanitizing of inputs and output in API
#371 opened Mar 10, 2021 by kltm
bioentity/{id} should include the alternative ids for both primary and deprecated ids
#369 opened Mar 5, 2021 by kshefchek
search api includes solr tokenizer fields unlikely useful for users
#366 opened Nov 21, 2020 by kshefchek
biolink-api /bioentity/function/ route does not seem to implement taxon filters bug
#365 opened Nov 11, 2020 by kltm
11
Add ability to filter variants by clinvar confidence score for disease variant associations
#364 opened Oct 26, 2020 by kshefchek
Add endpoint for variant pivot table on relation (patho, likely patho) and gene given a disease ID
#363 opened Oct 26, 2020 by kshefchek
gene_to_uniprot_from_mygene (mapping of HGNC issue)
#358 opened Jul 22, 2020 by lpalbou
1
Move data manipulation in monarch-ui to ontobio/biolink-api
#356 opened May 29, 2020 by kshefchek 2.0
1
Add news endpoint that returns monarch blog rss feed
#354 opened May 28, 2020 by kshefchek
Add synonym types to bioentity {id} endpoints
#353 opened May 27, 2020 by kshefchek
remove deprecated werkzeug.cached_property
#349 opened Feb 26, 2020 by kshefchek
1
Add tsv serializer to /sim/search and /sim/compare
#348 opened Feb 5, 2020 by kshefchek
Add equivalent ids in bioentity/{id} endpoint
#346 opened Jan 8, 2020 by kshefchek
ProTip! Exclude everything labeled bug with -label:bug.