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Test ggplot2 outputs #28

Merged
merged 12 commits into from
Nov 1, 2024
Merged

Test ggplot2 outputs #28

merged 12 commits into from
Nov 1, 2024

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Puzzled-Face
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PuzzledFace
PuzzledFace previously approved these changes Nov 1, 2024
Merge branch 'main' of github.com:openpharma/rbqmR into test-ggplot2-outputs

# Conflicts:
#	README.Rmd
#	README.md
#	man/figures/README-createQtlPlot-1.png
#	man/figures/README-unnamed-chunk-13-1.png
#	man/figures/README-unnamed-chunk-14-1.png
#	man/figures/README-unnamed-chunk-25-1.png
#	tests/testthat/test-createQtlBubblePlot.R
#	tests/testthat/test-createQtlPlot.R
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github-actions bot commented Nov 1, 2024

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Code Coverage Summary

Filename                                Stmts    Miss  Cover    Missing
------------------------------------  -------  ------  -------  ----------------------------------------------------------------------------
R/applyQtl.R                               21       0  100.00%
R/autorunJagsAndCaptureOutput.R            46       6  86.96%   63-66, 75-76
R/createBinomialInit.R                     43       3  93.02%   76-78
R/createObservedMinusExpectedPlot.R        55       0  100.00%
R/createObservedMinusExpectedTable.R       44       0  100.00%
R/createObservedOverExpectedPlot.R         34       1  97.06%   37
R/createObservedOverExpectedTable.R        34       0  100.00%
R/createPoissonInit.R                      43       3  93.02%   55-57
R/createQtlBubblePlot.R                    68       9  86.76%   78-84, 87, 126
R/createQtlPlot.R                          80      15  81.25%   45, 47-53, 56-62
R/fitBayesBinomialModel.R                  59       0  100.00%
R/fitBayesPoissonModel.R                   39       1  97.44%   92
R/getModelString.R                         82       1  98.78%   131
R/helpers.R                                69       1  98.55%   81
R/qtl-evaluation-methods.R                179      39  78.21%   127-129, 134, 155-161, 229-234, 258-265, 338-339, 342-343, 357, 365, 382-389
R/shadeRange.R                             31       8  74.19%   58, 74-80
TOTAL                                     927      87  90.61%

Diff against main

Filename      Stmts    Miss  Cover
----------  -------  ------  --------
TOTAL             0       0  +100.00%

Results for commit: 658abd7

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results

@PuzzledFace PuzzledFace merged commit f970c3d into main Nov 1, 2024
@PuzzledFace PuzzledFace mentioned this pull request Nov 1, 2024
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2 participants