The Blue Brain Project

All

326 repositories

morph-tool
Public
Python
•
GNU Lesser General Public License v3.0
•7•8•1•5•Updated Nov 23, 2024Nov 23, 2024
data-integration-pipelines
Public
Pipelines for data curation and integrations in Blue Brain
AGS Script
•
Apache License 2.0
•0•0•0•0•Updated Nov 23, 2024Nov 23, 2024
spacktainers
Public
Python
•
Apache License 2.0
•0•1•0•2•Updated Nov 23, 2024Nov 23, 2024
experimental-protocol-fetcher
Public
Methods for retrieval of the experimental protocols used in the creation of ME-Model-s
database
Python
•
Apache License 2.0
•0•1•0•0•Updated Nov 23, 2024Nov 23, 2024
knowledge-graph-inference
Public
Tools for recommendation of data inside a knowledge graph.
database
Python
•
Apache License 2.0
•0•1•0•0•Updated Nov 23, 2024Nov 23, 2024
knowledge-graph-similarity
Public
Knowledge graph similarity
database
Python
•
Apache License 2.0
•0•0•0•0•Updated Nov 23, 2024Nov 23, 2024
BluePyEModel
Public
Blue Brain Python Electrical Modeling Pipeline
python workflow build simulation neuroscience modelling parameter analyse neuron optimisation
Python
•
Other
•5•6•0•1•Updated Nov 22, 2024Nov 22, 2024
nexus
Public
Blue Brain Nexus - A knowledge graph for data-driven science
scala nexus provenance knowledge-graph shacl
Scala
•
Apache License 2.0
•74•280•375•0•Updated Nov 22, 2024Nov 22, 2024
spack
Public
A flexible package manager that supports multiple versions, configurations, platforms, and compilers.
Python
•
Other
•2.3k•9•2•41•Updated Nov 22, 2024Nov 22, 2024
Brayns
Public
Visualizer for large-scale and interactive ray-tracing of neurons
visualization python interactive websockets neuroscience json-rpc neurons raytracing volume-rendering pathtracing
C++
•
GNU Lesser General Public License v3.0
•47•291•0•1•Updated Nov 22, 2024Nov 22, 2024
aws-terrraform-deployment-common
Public
HCL
•
Apache License 2.0
•0•0•0•0•Updated Nov 22, 2024Nov 22, 2024
nexus-forge
Public
Building and Using Knowledge Graphs made easy
data-science rdf knowledge-graph json-ld data-management shacl knowledge-engineering knowledgegraph
Python
•
GNU Lesser General Public License v3.0
•19•39•49•8•Updated Nov 22, 2024Nov 22, 2024
MultiscaleRun
Public
Python package to run brain cells simulation at different scales
hpc neuroscience simulation-framework supercomputing molecular-modeling
Jupyter Notebook
•
GNU Lesser General Public License v3.0
•0•1•6•4•Updated Nov 22, 2024Nov 22, 2024
region-grower
Public
Neuronal synthesis in atlas-based regions
Python
•
Apache License 2.0
•0•0•0•2•Updated Nov 22, 2024Nov 22, 2024
aws-parallel-cluster
Public
Shell
•
Apache License 2.0
•0•0•0•0•Updated Nov 22, 2024Nov 22, 2024
core-web-app
Public
Open Brain Platform
neuroscience simulation-neuroscience
TypeScript
•
Apache License 2.0
•0•4•0•0•Updated Nov 22, 2024Nov 22, 2024
brain-modeling-ontology
Public
BBP ontologies and schemas as well as the pipeline synchronizing them in the knowledge graph.
database atlas
Python
•
Apache License 2.0
•0•0•0•0•Updated Nov 22, 2024Nov 22, 2024
molsys-metabolismndam
Public
Jupyter Notebook
•0•0•0•0•Updated Nov 22, 2024Nov 22, 2024
atlas-densities
Public
Tools to compute densities in the context of brain atlases.
build atlas
Python
•
Apache License 2.0
•8•4•8•5•Updated Nov 22, 2024Nov 22, 2024
appositionizer
Public
Detect physical locations for synapses
neuroscience connectome connectome-generation
C++
•
Apache License 2.0
•0•0•0•0•Updated Nov 21, 2024Nov 21, 2024
virtual-lab-api
Public
Source code for the virtual labs RESTful API
neuroscience restful-api
Python
•
Apache License 2.0
•0•1•0•1•Updated Nov 21, 2024Nov 21, 2024
aws-terrraform-deployment
Public
HCL
•
Apache License 2.0
•0•0•0•0•Updated Nov 21, 2024Nov 21, 2024
neurodamus
Public
A BBP Simulation Control application for NEURON
simulation cellular neuron-simulations brain
Python
•
Apache License 2.0
•8•9•9•4•Updated Nov 21, 2024Nov 21, 2024
blueconfigs
Public
Shell
•
Apache License 2.0
•0•0•0•1•Updated Nov 21, 2024Nov 21, 2024
morph-validator
Public
Python
•
Apache License 2.0
•0•0•0•0•Updated Nov 21, 2024Nov 21, 2024
sonata-network-reduction
Public
Python
•
Apache License 2.0
•0•0•0•0•Updated Nov 21, 2024Nov 21, 2024
atlas-building-tools
Public
Python
•
Apache License 2.0
•0•0•0•0•Updated Nov 21, 2024Nov 21, 2024
circuit-build
Public
AGS Script
•
Apache License 2.0
•1•0•0•1•Updated Nov 21, 2024Nov 21, 2024
poisson-recon-pybind
Public
C++
•
Apache License 2.0
•0•0•0•0•Updated Nov 21, 2024Nov 21, 2024
Bluenaas
Public
Source code for running and retrieving neuron simulations
Python
•
Apache License 2.0
•0•0•0•7•Updated Nov 21, 2024Nov 21, 2024